| Package | hl7.fhir.uv.omop |
| Type | StructureMap |
| Id | Id |
| FHIR Version | R5 |
| Source | http://hl7.org/fhir/uv/omop/https://build.fhir.org/ig/HL7/fhir-omop-ig/StructureMap-MeasurementMap.html |
| Url | http://hl7.org/fhir/uv/omop/StructureMap/MeasurementMap |
| Version | 0.1.0 |
| Status | draft |
| Date | 2025-06-26T15:12:06+00:00 |
| Name | MeasurementMap |
| Title | Mapping Observation resource to Measurement OMOP Domain |
| Experimental | False |
| Realm | uv |
| Authority | hl7 |
| Description | MappingObservationresourcetoMeasurementOMOPDomain |
No resources found
No resources found
Note: links and images are rebased to the (stated) source
Generated Narrative: StructureMap MeasurementMap
/// url = 'http://hl7.org/fhir/uv/omop/StructureMap/MeasurementMap' /// name = 'MeasurementMap' /// title = 'Mapping Observation resource to Measurement OMOP Domain' /// status = 'draft' uses "http://hl7.org/fhir/StructureDefinition/Observation" alias Observation as source uses "http://hl7.org/fhir/uv/omop/StructureDefinition/Measurement" alias MeasureTable as target group Measures(source src : Observation, target tgt : MeasureTable) { src where ('vital-signs' | 'laboratory').supersetOf(Observation.category.coding.code) then { src.code as s -> tgt then { s.coding as sc -> tgt then { sc.code as a -> tgt.measurement_concept_id = a; }; }; // src.id as id -> tgt.measurement_id = cast(id, "integer"); src.effective : dateTime as edt -> tgt.measurement_datetime = edt, tgt.measurement_date = cast(edt, 'date'); // src.subject as s -> tgt then { src.effective : instant as einst -> tgt.measurement_datetime = cast(einst, 'dateTime'), tgt.measurement_date = cast(einst, 'date'); src.effective : Period as s -> tgt then { s.start as eps -> tgt.measurement_datetime = cast(eps, 'dateTime'), tgt.measurement_date = cast(eps, 'date'); }; src.issued as s where (src.issued.toDate != src.effectiveDateTime) -> tgt.measurement_source_value = cast(s, 'string'); src.value : Quantity as s -> tgt then { s.value as a -> tgt.value_as_number = a; s.unit as b -> tgt.unit_concept_id = b; }; // src.performer as s -> tgt then { src.value : CodeableConcept as s -> tgt then { s.coding as sc -> tgt then { sc.code as a -> tgt.value_as_concept_id = a; }; }; src.value : string as b -> tgt.value_source_value = b; src.interpretation as c -> tgt.value_as_concept_id = c; src.note as d -> tgt.measurement_source_value = d; } "OnlyMeasures"; }
FHIR{
"resourceType" : "StructureMap",
"id" : "MeasurementMap",
"text" : {
"status" : "generated",
"div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: StructureMap MeasurementMap</b></p><a name=\"MeasurementMap\"> </a><a name=\"hcMeasurementMap\"> </a><pre class=\"fml\">\r\n<span style=\"color: #cc00cc\">/// <b>url</b> = </span><span style=\"color: blue\">'http://hl7.org/fhir/uv/omop/StructureMap/MeasurementMap'</span>\r\n<span style=\"color: #cc00cc\">/// <b>name</b> = </span><span style=\"color: blue\">'MeasurementMap'</span>\r\n<span style=\"color: #cc00cc\">/// <b>title</b> = </span><span style=\"color: blue\">'Mapping Observation resource to Measurement OMOP Domain'</span>\r\n<span style=\"color: #cc00cc\">/// <b>status</b> = </span><span style=\"color: blue\">'draft'</span>\r\n\r\n<b>uses</b><span style=\"color: navy\"> "</span><a href=\"http://hl7.org/fhir/R5/observation.html\" title=\"Observation\">http://hl7.org/fhir/StructureDefinition/Observation</a><span style=\"color: navy\">" </span><b>alias </b>Observation <b>as </b><b>source</b>\r\n<b>uses</b><span style=\"color: navy\"> "</span><a href=\"StructureDefinition-Measurement.html\" title=\"Measurement OMOP Table\">http://hl7.org/fhir/uv/omop/StructureDefinition/Measurement</a><span style=\"color: navy\">" </span><b>alias </b>MeasureTable <b>as </b><b>target</b>\r\n\r\n<b>group </b>Measures<span style=\"color: navy\">(</span><b>source</b> <span style=\"color: maroon\">src</span><span style=\"color: navy\"> : </span>Observation, <b>target</b> <span style=\"color: maroon\">tgt</span><span style=\"color: navy\"> : </span>MeasureTable<span style=\"color: navy\">)</span><span style=\"color: navy\"> {\r\n</span> src<b> where </b>('vital-signs' | 'laboratory').supersetOf(Observation.category.coding.code)<b> then</b><span style=\"color: navy\"> {\r\n</span> src.code<b> as </b><span style=\"color: maroon\">s</span><span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">tgt</span><b> then</b><span style=\"color: navy\"> {\r\n</span> s.coding<b> as </b><span style=\"color: maroon\">sc</span><span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">tgt</span><b> then</b><span style=\"color: navy\"> {\r\n</span> sc.code<b> as </b><span style=\"color: maroon\">a</span><span style=\"color: navy\"><b> -> </b></span>tgt.measurement_concept_id = <span style=\"color: maroon\">a</span><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span> <span style=\"color: navy\">// </span><span style=\"color: green\">src.id as id -> tgt.measurement_id = cast(id, "integer");</span>\r\n src.effective<span style=\"color: navy\"> : </span>dateTime<b> as </b><span style=\"color: maroon\">edt</span><span style=\"color: navy\"><b> -> </b></span> tgt.measurement_datetime = <span style=\"color: maroon\">edt</span><span style=\"color: navy\">, </span> tgt.measurement_date = <b>cast</b><span style=\"color: navy\">(</span><span style=\"color: maroon\">edt</span><span style=\"color: navy\">, </span><span style=\"color: blue\">'date'</span><span style=\"color: navy\">)</span><span style=\"color: navy\">;</span> <span style=\"color: navy\">// </span><span style=\"color: green\">src.subject as s -> tgt then {</span>\r\n src.effective<span style=\"color: navy\"> : </span>instant<b> as </b><span style=\"color: maroon\">einst</span><span style=\"color: navy\"><b> -> </b></span> tgt.measurement_datetime = <b>cast</b><span style=\"color: navy\">(</span><span style=\"color: maroon\">einst</span><span style=\"color: navy\">, </span><span style=\"color: blue\">'dateTime'</span><span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> tgt.measurement_date = <b>cast</b><span style=\"color: navy\">(</span><span style=\"color: maroon\">einst</span><span style=\"color: navy\">, </span><span style=\"color: blue\">'date'</span><span style=\"color: navy\">)</span><span style=\"color: navy\">;</span>\r\n src.effective<span style=\"color: navy\"> : </span>Period<b> as </b><span style=\"color: maroon\">s</span><span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">tgt</span><b> then</b><span style=\"color: navy\"> {\r\n</span> s.start<b> as </b><span style=\"color: maroon\">eps</span><span style=\"color: navy\"><b> -> </b></span> tgt.measurement_datetime = <b>cast</b><span style=\"color: navy\">(</span><span style=\"color: maroon\">eps</span><span style=\"color: navy\">, </span><span style=\"color: blue\">'dateTime'</span><span style=\"color: navy\">)</span><span style=\"color: navy\">, </span> tgt.measurement_date = <b>cast</b><span style=\"color: navy\">(</span><span style=\"color: maroon\">eps</span><span style=\"color: navy\">, </span><span style=\"color: blue\">'date'</span><span style=\"color: navy\">)</span><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n src.issued<b> as </b><span style=\"color: maroon\">s</span><b> where </b>(src.issued.toDate != src.effectiveDateTime)<span style=\"color: navy\"><b> -> </b></span>tgt.measurement_source_value = <b>cast</b><span style=\"color: navy\">(</span><span style=\"color: maroon\">s</span><span style=\"color: navy\">, </span><span style=\"color: blue\">'string'</span><span style=\"color: navy\">)</span><span style=\"color: navy\">;</span>\r\n src.value<span style=\"color: navy\"> : </span>Quantity<b> as </b><span style=\"color: maroon\">s</span><span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">tgt</span><b> then</b><span style=\"color: navy\"> {\r\n</span> s.value<b> as </b><span style=\"color: maroon\">a</span><span style=\"color: navy\"><b> -> </b></span>tgt.value_as_number = <span style=\"color: maroon\">a</span><span style=\"color: navy\">;</span>\r\n s.unit<b> as </b><span style=\"color: maroon\">b</span><span style=\"color: navy\"><b> -> </b></span>tgt.unit_concept_id = <span style=\"color: maroon\">b</span><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span> <span style=\"color: navy\">// </span><span style=\"color: green\">src.performer as s -> tgt then {</span>\r\n src.value<span style=\"color: navy\"> : </span>CodeableConcept<b> as </b><span style=\"color: maroon\">s</span><span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">tgt</span><b> then</b><span style=\"color: navy\"> {\r\n</span> s.coding<b> as </b><span style=\"color: maroon\">sc</span><span style=\"color: navy\"><b> -> </b></span><span style=\"color: maroon\">tgt</span><b> then</b><span style=\"color: navy\"> {\r\n</span> sc.code<b> as </b><span style=\"color: maroon\">a</span><span style=\"color: navy\"><b> -> </b></span>tgt.value_as_concept_id = <span style=\"color: maroon\">a</span><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span><span style=\"color: navy\">;</span>\r\n src.value<span style=\"color: navy\"> : </span>string<b> as </b><span style=\"color: maroon\">b</span><span style=\"color: navy\"><b> -> </b></span>tgt.value_source_value = <span style=\"color: maroon\">b</span><span style=\"color: navy\">;</span>\r\n src.interpretation<b> as </b><span style=\"color: maroon\">c</span><span style=\"color: navy\"><b> -> </b></span>tgt.value_as_concept_id = <span style=\"color: maroon\">c</span><span style=\"color: navy\">;</span>\r\n src.note<b> as </b><span style=\"color: maroon\">d</span><span style=\"color: navy\"><b> -> </b></span>tgt.measurement_source_value = <span style=\"color: maroon\">d</span><span style=\"color: navy\">;</span>\r\n <span style=\"color: navy\">}</span> <i>"OnlyMeasures"</i><span style=\"color: navy\">;</span>\r\n<span style=\"color: navy\">}\r\n\r\n</span></pre></div>"
},
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-wg",
"valueCode" : "brr"
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm",
"valueInteger" : 1,
"_valueInteger" : {
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-conformance-derivedFrom",
"valueCanonical" : "http://hl7.org/fhir/uv/omop/ImplementationGuide/hl7.fhir.uv.omop"
}
]
}
},
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
"valueCode" : "draft",
"_valueCode" : {
"extension" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/structuredefinition-conformance-derivedFrom",
"valueCanonical" : "http://hl7.org/fhir/uv/omop/ImplementationGuide/hl7.fhir.uv.omop"
}
]
}
}
],
"url" : "http://hl7.org/fhir/uv/omop/StructureMap/MeasurementMap",
"version" : "0.1.0",
"name" : "MeasurementMap",
"title" : "Mapping Observation resource to Measurement OMOP Domain",
"status" : "draft",
"date" : "2025-06-26T15:12:06+00:00",
"publisher" : "HL7 International / Biomedical Research and Regulation",
"contact" : [
{
"name" : "HL7 International / Biomedical Research and Regulation",
"telecom" : [
{
"system" : "url",
"value" : "http://www.hl7.org/Special/committees/rcrim"
}
]
}
],
"description" : "MappingObservationresourcetoMeasurementOMOPDomain",
"jurisdiction" : [
{
"coding" : [
{
"system" : "http://unstats.un.org/unsd/methods/m49/m49.htm",
"code" : "001",
"display" : "World"
}
]
}
],
"structure" : [
{
"url" : "http://hl7.org/fhir/StructureDefinition/Observation",
"mode" : "source",
"alias" : "Observation"
},
{
"url" : "http://hl7.org/fhir/uv/omop/StructureDefinition/Measurement",
"mode" : "target",
"alias" : "MeasureTable"
}
],
"group" : [
{
"name" : "Measures",
"input" : [
{
"name" : "src",
"type" : "Observation",
"mode" : "source"
},
{
"name" : "tgt",
"type" : "MeasureTable",
"mode" : "target"
}
],
"rule" : [
{
"name" : "OnlyMeasures",
"source" : [
{
"context" : "src",
"condition" : "('vital-signs' | 'laboratory').supersetOf(Observation.category.coding.code)"
}
],
"rule" : [
{
"name" : "code",
"source" : [
{
"context" : "src",
"element" : "code",
"variable" : "s"
}
],
"target" : [
{
"transform" : "copy",
"parameter" : [
{
"valueId" : "tgt"
}
]
}
],
"rule" : [
{
"name" : "coding",
"source" : [
{
"context" : "s",
"element" : "coding",
"variable" : "sc"
}
],
"target" : [
{
"transform" : "copy",
"parameter" : [
{
"valueId" : "tgt"
}
]
}
],
"rule" : [
{
"name" : "code",
"source" : [
{
"context" : "sc",
"element" : "code",
"variable" : "a"
}
],
"target" : [
{
"context" : "tgt",
"element" : "measurement_concept_id",
"transform" : "copy",
"parameter" : [
{
"valueId" : "a"
}
]
}
]
}
]
}
],
"documentation" : "src.id as id -> tgt.measurement_id = cast(id, \"integer\");"
},
{
"name" : "effectiveDateTime",
"source" : [
{
"context" : "src",
"type" : "dateTime",
"element" : "effective",
"variable" : "edt"
}
],
"target" : [
{
"context" : "tgt",
"element" : "measurement_datetime",
"transform" : "copy",
"parameter" : [
{
"valueId" : "edt"
}
]
},
{
"context" : "tgt",
"element" : "measurement_date",
"transform" : "cast",
"parameter" : [
{
"valueId" : "edt"
},
{
"valueString" : "date"
}
]
}
],
"documentation" : "src.subject as s -> tgt then {"
},
{
"name" : "effectiveInstant",
"source" : [
{
"context" : "src",
"type" : "instant",
"element" : "effective",
"variable" : "einst"
}
],
"target" : [
{
"context" : "tgt",
"element" : "measurement_datetime",
"transform" : "cast",
"parameter" : [
{
"valueId" : "einst"
},
{
"valueString" : "dateTime"
}
]
},
{
"context" : "tgt",
"element" : "measurement_date",
"transform" : "cast",
"parameter" : [
{
"valueId" : "einst"
},
{
"valueString" : "date"
}
]
}
]
},
{
"name" : "effectivePeriod",
"source" : [
{
"context" : "src",
"type" : "Period",
"element" : "effective",
"variable" : "s"
}
],
"target" : [
{
"transform" : "copy",
"parameter" : [
{
"valueId" : "tgt"
}
]
}
],
"rule" : [
{
"name" : "start",
"source" : [
{
"context" : "s",
"element" : "start",
"variable" : "eps"
}
],
"target" : [
{
"context" : "tgt",
"element" : "measurement_datetime",
"transform" : "cast",
"parameter" : [
{
"valueId" : "eps"
},
{
"valueString" : "dateTime"
}
]
},
{
"context" : "tgt",
"element" : "measurement_date",
"transform" : "cast",
"parameter" : [
{
"valueId" : "eps"
},
{
"valueString" : "date"
}
]
}
]
}
]
},
{
"name" : "issued",
"source" : [
{
"context" : "src",
"element" : "issued",
"variable" : "s",
"condition" : "(src.issued.toDate != src.effectiveDateTime)"
}
],
"target" : [
{
"context" : "tgt",
"element" : "measurement_source_value",
"transform" : "cast",
"parameter" : [
{
"valueId" : "s"
},
{
"valueString" : "string"
}
]
}
]
},
{
"name" : "valueQuantity",
"source" : [
{
"context" : "src",
"type" : "Quantity",
"element" : "value",
"variable" : "s"
}
],
"target" : [
{
"transform" : "copy",
"parameter" : [
{
"valueId" : "tgt"
}
]
}
],
"rule" : [
{
"name" : "value",
"source" : [
{
"context" : "s",
"element" : "value",
"variable" : "a"
}
],
"target" : [
{
"context" : "tgt",
"element" : "value_as_number",
"transform" : "copy",
"parameter" : [
{
"valueId" : "a"
}
]
}
]
},
{
"name" : "unit",
"source" : [
{
"context" : "s",
"element" : "unit",
"variable" : "b"
}
],
"target" : [
{
"context" : "tgt",
"element" : "unit_concept_id",
"transform" : "copy",
"parameter" : [
{
"valueId" : "b"
}
]
}
]
}
],
"documentation" : "src.performer as s -> tgt then {"
},
{
"name" : "valueCodeableConcept",
"source" : [
{
"context" : "src",
"type" : "CodeableConcept",
"element" : "value",
"variable" : "s"
}
],
"target" : [
{
"transform" : "copy",
"parameter" : [
{
"valueId" : "tgt"
}
]
}
],
"rule" : [
{
"name" : "coding",
"source" : [
{
"context" : "s",
"element" : "coding",
"variable" : "sc"
}
],
"target" : [
{
"transform" : "copy",
"parameter" : [
{
"valueId" : "tgt"
}
]
}
],
"rule" : [
{
"name" : "code",
"source" : [
{
"context" : "sc",
"element" : "code",
"variable" : "a"
}
],
"target" : [
{
"context" : "tgt",
"element" : "value_as_concept_id",
"transform" : "copy",
"parameter" : [
{
"valueId" : "a"
}
]
}
]
}
]
}
]
},
{
"name" : "valueString",
"source" : [
{
"context" : "src",
"type" : "string",
"element" : "value",
"variable" : "b"
}
],
"target" : [
{
"context" : "tgt",
"element" : "value_source_value",
"transform" : "copy",
"parameter" : [
{
"valueId" : "b"
}
]
}
]
},
{
"name" : "interpretation",
"source" : [
{
"context" : "src",
"element" : "interpretation",
"variable" : "c"
}
],
"target" : [
{
"context" : "tgt",
"element" : "value_as_concept_id",
"transform" : "copy",
"parameter" : [
{
"valueId" : "c"
}
]
}
]
},
{
"name" : "note",
"source" : [
{
"context" : "src",
"element" : "note",
"variable" : "d"
}
],
"target" : [
{
"context" : "tgt",
"element" : "measurement_source_value",
"transform" : "copy",
"parameter" : [
{
"valueId" : "d"
}
]
}
]
}
]
}
]
}
]
}
XIG built as of ??metadata-date??. Found ??metadata-resources?? resources in ??metadata-packages?? packages.